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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922811.1_cds_XP_016471587.1_63911
CDS Infomation

[gene=LOC107793697] [db_xref=GeneID:107793697] [protein=interferon-related developmental regulator 1-like] [protein_id=XP_016471587.1] [location=join(28767..28894,29013..29093,29201..29283,29533..29642,29745..29858,30546..30628,30718..30931,31027..31104,31333..31383,31476..31565,31739..31789,32442..32519,32622..32678)] [gbkey=CDS]
Sequence

ATGACAGATTCAGATTGTACGGAGTTTGAGAGAACGAAACCCAGAAAGAGGCGTCAAAAG
CTTATTAAGCGTCCAATTTCAAGATCAAAAACTGTTTGTGATTATTTAGAAGAACTGTAT
AAAAAGAAGGGATCCATAAGAGAAGACGCACTAGGCAAATTGATCAATGAATTTAAGAAA
GCGGTGCGATATGAATTTGCTCAGAATATTTGTGTTACTTTAACACACCGATGCGAAAAT
TCGTTGAAGCGGGGTTCTGCTTTGGAAATTGATCTTGCACTACAACTTATAGGATTGTTA
GCAATAACACTTGGGGCTGGAGATCATGCACATGAGATATATGAATATTCACTAGAGTTT
CTTCCTCAAGTTCTCAAATCCAAGTCATCTCATTCTGCCAAGGTATTAGAATGTTTGGCT
ATTGTCACCCTTATTGGTGCCAAAAATACTGATGAAACAGAAAGATCCATGGAGATTATT
TGGAAAATCATGAATGAAAAAGAGACAAAACCCAGTGTTGTTGCTGCAGCAATATCTGCC
TGGTCTCTTCTCCTTTCAGAAATAAATGGATGGTGTGTTAATCACAAGAAATGGAAAGGG
TTGTTCTCGTATTTGCTGAAACAACTAGAGGAAGATTATGATCAAAATGTCAATTCTGCC
TGCGTAGAAGCACTTGGTGTAATTTTTGAAAATGGCAGCCTTGAGAAATTTTCAGATGAT
GCAGAAAATTATGCAAACTTAAAAGACATGAAAGATGATATATTGATAAGAGCTTCAAGT
GTTACCAAAGAAAATGCTTTAAAACTTCTTGAGGATAATAGTGAAAAGAAAATCACACTC
ACAATATGTGAAACTACATTGACCTTAAGCACTTTTTCCCTCGTGAAGCAGATTAATTAT
TTAAAAAGATATCTAGGCGATGGCTTTAAAAATCACATGAAGGATAACGAGCACCTCCAT
AATATTTTTCAATTTTGGCCAGAGACAACTTCTGAAGATGGCGAAGATTTGTATCAACCC
GAATTTGAAGGGGTGGCTCTTCGGGTTTTTGCACCTCACATTAGAAGGGAAGCTTGCACA
AAGAGGATTTCCATGTCGCCTAGTTCTTTCCTGAGCAAGGCAAATACTCAATTGAGGAAC
AAGTACAGGATGCTTGCAGAGAAGACTAAGGCTGGAGAATATGGAGTTGATCAAGAGTTT
GAATATGATGAATACTAG

Peptide Sequence

PEP ID

XP_016471587.1
PEP Infomation

PREDICTED: interferon-related developmental regulator 1-like [Nicotiana tabacum]
Sequence

MTDSDCTEFERTKPRKRRQKLIKRPISRSKTVCDYLEELYKKKGSIREDALGKLINEFKK
AVRYEFAQNICVTLTHRCENSLKRGSALEIDLALQLIGLLAITLGAGDHAHEIYEYSLEF
LPQVLKSKSSHSAKVLECLAIVTLIGAKNTDETERSMEIIWKIMNEKETKPSVVAAAISA
WSLLLSEINGWCVNHKKWKGLFSYLLKQLEEDYDQNVNSACVEALGVIFENGSLEKFSDD
AENYANLKDMKDDILIRASSVTKENALKLLEDNSEKKITLTICETTLTLSTFSLVKQINY
LKRYLGDGFKNHMKDNEHLHNIFQFWPETTSEDGEDLYQPEFEGVALRVFAPHIRREACT
KRISMSPSSFLSKANTQLRNKYRMLAEKTKAGEYGVDQEFEYDEY

Transcript Sequence

Gene sequence data has not been registered.